Sensitive mutation detection in heterogeneous cancer specimens by massively parallel picoliter react

Author:  ["Roman K Thomas","Elizabeth Nickerson","Jan F Simons","Pasi A Jänne","Torstein Tengs","Yuki Yuza","Levi A Garraway","Thomas LaFramboise","Jeffrey C Lee","Kinjal Shah","Keith O'Neill","Hidefumi Sasaki","Neal Lindeman","Kwok-Kin Wong","Ana M Borras","Edward J Gutmann","Konstantin H Dragnev","Ralph DeBiasi","Tzu-Hsiu Chen","Karen A Glatt","Heidi Greulich","Brian Desany","Christine K Lubeski","William Brockman","Pablo Alvarez","Stephen K Hutchison","J H Leamon","Michael T Ronan","Gregory S Turenchalk","Michael Egholm","William R Sellers","Jonathan M Rothberg","Matthew Meyerson"]

Publication:  Nature Medicine

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Tags:     Medicine

Abstract

The sensitivity of conventional DNA sequencing in tumor biopsies is limited by stromal contamination and by genetic heterogeneity within the cancer. Here, we show that microreactor-based pyrosequencing can detect rare cancer-associated sequence variations by independent and parallel sampling of multiple representatives of a given DNA fragment. This technology can thereby facilitate accurate molecular diagnosis of heterogeneous cancer specimens and enable patient selection for targeted cancer therapies. NOTE: In the version of this article initially published, it should have been acknowledged that Jan F. Simons, in addition to Roman K. Thomas and Elizabeth Nickerson, contributed equally to this work. The error has been corrected in the HTML and PDF versions of the article.

Cite this article

Thomas, R., Nickerson, E., Simons, J. et al. Sensitive mutation detection in heterogeneous cancer specimens by massively parallel picoliter reactor sequencing. Nat Med 12, 852–855 (2006). https://doi.org/10.1038/nm1437

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